ID Q6PCR4_DANRE Unreviewed; 525 AA.
AC Q6PCR4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 10-MAY-2017, entry version 94.
DE SubName: Full=RAN-binding protein 3b {ECO:0000313|Ensembl:ENSDARP00000090946};
DE SubName: Full=Zgc:66385 {ECO:0000313|EMBL:AAH59200.1};
GN Name=ranbp3b {ECO:0000313|Ensembl:ENSDARP00000090946,
GN ECO:0000313|ZFIN:ZDB-GENE-040426-1627};
GN ORFNames=zgc:66385 {ECO:0000313|EMBL:AAH59200.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH59200.1};
RN [1] {ECO:0000313|EMBL:AAH59200.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Whole body {ECO:0000313|EMBL:AAH59200.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000090946}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000090946};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000090946, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000090946,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; CU693369; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CU693493; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC059200; AAH59200.1; -; mRNA.
DR RefSeq; NP_956984.1; NM_200690.1.
DR UniGene; Dr.77684; -.
DR STRING; 7955.ENSDARP00000090946; -.
DR Ensembl; ENSDART00000100173; ENSDARP00000090946; ENSDARG00000069056.
DR GeneID; 393663; -.
DR KEGG; dre:393663; -.
DR CTD; 393663; -.
DR ZFIN; ZDB-GENE-040426-1627; ranbp3b.
DR eggNOG; KOG0866; Eukaryota.
DR eggNOG; ENOG4111NCK; LUCA.
DR GeneTree; ENSGT00530000063644; -.
DR HOGENOM; HOG000290662; -.
DR HOVERGEN; HBG061383; -.
DR KO; K15304; -.
DR OMA; LQYISTP; -.
DR OrthoDB; EOG091G076E; -.
DR TreeFam; TF313181; -.
DR Proteomes; UP000000437; Chromosome 2.
DR Bgee; ENSDARG00000069056; -.
DR GO; GO:0005813; C:centrosome; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0008536; F:Ran GTPase binding; IBA:GO_Central.
DR GO; GO:0000082; P:G1/S transition of mitotic cell cycle; IBA:GO_Central.
DR GO; GO:0043547; P:positive regulation of GTPase activity; IEA:GOC.
DR GO; GO:0046604; P:positive regulation of mitotic centrosome separation; IBA:GO_Central.
DR GO; GO:0006606; P:protein import into nucleus; IBA:GO_Central.
DR GO; GO:0006405; P:RNA export from nucleus; IBA:GO_Central.
DR GO; GO:0007051; P:spindle organization; IBA:GO_Central.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 2.30.29.30; -; 1.
DR InterPro; IPR011993; PH_dom-like.
DR InterPro; IPR000156; Ran_bind_dom.
DR Pfam; PF00638; Ran_BP1; 1.
DR SMART; SM00160; RanBD; 1.
DR SUPFAM; SSF50729; SSF50729; 1.
DR PROSITE; PS50196; RANBD1; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:Q6PCR4};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 339 418 RanBD1. {ECO:0000259|PROSITE:PS50196}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 334 449 ismart:RanBD [T]
FT MYHIT 342 442 ipfam:Ran_BP1 [T]
FT MYHIT 339 418 iprf:RANBD1 [T]
SQ SEQUENCE 525 AA; 56248 MW; F2F2832350F42E13 CRC64;
MADLANEEKP AIAPPVFVFQ KDKAQKRSAD GSSAEDGDDS DRDDGEYCPP VKRERTSSLT
QFPPSHSVPK NNIFMPSSLC QSPTGNSDSE PEEKPVGFRL KPPTLIHGQA PSAGCFPGVP
SQKPKEQQRS VLRPAVLQAP AAKTLTEPVK TNSSCGTNGV GKFGDSSSEN RSIFLNNTES
SDKSPKREKE GEENGGAQKD DSSQKKDGAV DSSFVFGQNI KERAKLEENS TNSDSKDSTQ
DPGSTNYFLQ YMGSSSSNNA TNSSDKGSKF VFGQNMSERV LSPPKGGEVS AEASKEVSAP
VSEPSSQEAT PEKNHSVTES LEESAAAYTK ATAKKCILEK VEVRTGEEAE SNVLQMQCKL
FVFDKPVQSW VERGRGLLRL NDMASTDDGS LQSRLVMRTQ GSLRLILNTK LWPQMQVDKA
SEKSVRITAM DTEDQGVKVF LISASSKDAG QLAAALHHRI LALKSRVEQE PESTPAPAEP
EIPQSNEDDS DDDQPANSNS SGGGTGNSTA SGNCETSEPP ASEST
//
|
