ID B3DHH3_DANRE Unreviewed; 251 AA.
AC B3DHH3;
DT 22-JUL-2008, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2008, sequence version 1.
DT 10-MAY-2017, entry version 65.
DE SubName: Full=Zgc:194252 {ECO:0000313|EMBL:AAI62764.1, ECO:0000313|Ensembl:ENSDARP00000053212};
GN ORFNames=zgc:194252 {ECO:0000313|EMBL:AAI62764.1,
GN ECO:0000313|Ensembl:ENSDARP00000053212,
GN ECO:0000313|ZFIN:ZDB-GENE-081022-86};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI62764.1};
RN [1] {ECO:0000313|EMBL:AAI62764.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000053212}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000053212};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000053212, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000053212,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CU972454; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC162764; AAI62764.1; -; mRNA.
DR RefSeq; NP_001122180.1; NM_001128708.1.
DR UniGene; Dr.148376; -.
DR Ensembl; ENSDART00000053213; ENSDARP00000053212; ENSDARG00000057142.
DR GeneID; 561367; -.
DR KEGG; dre:561367; -.
DR ZFIN; ZDB-GENE-081022-86; zgc:194252.
DR GeneTree; ENSGT00720000108589; -.
DR HOGENOM; HOG000251586; -.
DR HOVERGEN; HBG101296; -.
DR OMA; CMIASEV; -.
DR OrthoDB; EOG091G0MK5; -.
DR TreeFam; TF334817; -.
DR Proteomes; UP000000437; Chromosome 7.
DR Gene3D; 3.10.100.10; -; 2.
DR InterPro; IPR001304; C-type_lectin-like.
DR InterPro; IPR016186; C-type_lectin-like/link.
DR InterPro; IPR016187; CTDL_fold.
DR Pfam; PF00059; Lectin_C; 2.
DR SMART; SM00034; CLECT; 2.
DR SUPFAM; SSF56436; SSF56436; 2.
DR PROSITE; PS50041; C_TYPE_LECTIN_2; 2.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 24 130 C-type lectin.
FT {ECO:0000259|PROSITE:PS50041}.
FT DOMAIN 125 245 C-type lectin.
FT {ECO:0000259|PROSITE:PS50041}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 131 245 ismart:CLECT [T]
FT MYHIT 11 130 ismart:CLECT [T]
FT MYHIT 24 130 iprf:C_TYPE_LECTIN_2 [T]
FT MYHIT 141 245 ipfam:Lectin_C [T]
FT MYHIT 30 130 ipfam:Lectin_C [T]
FT MYHIT 125 245 iprf:C_TYPE_LECTIN_2 [T]
SQ SEQUENCE 251 AA; 28934 MW; 5D090014779B3C7F CRC64;
MKASITLLFF FSLFGVSLGA FRLHFFVNKT LSWQDAQKYC RQNYDDLSTV GSKDLEALSS
NPLIKEDYFW IGLQNNRNQW IWSTGEEARV TFWDKGEPTI LLGGNCGGVN KNTFKASNIG
CNDQLHFYCM FVFELIVIHQ ESTWEEALLY CPQHYLGLAI IDSKDMMVEA KINSTEADTD
DLWIGLRFLA GSWFWVNGKG VDYKAWSSNG ELQCPAMNQR CGVYNRAKEV WTPTDCVRRL
NFLCVKRKYI N
//
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