16 Metamotif I: “domain A followed by domain B”

As suggested by their names, the patterns pat:NA_SOLUT_SYMP_1 and pat:NA_SOLUT_SYMP_2 are usually associated.

  • Find in which protein, and where exactly, the former is followed by the latter.
  • Find all hits by either one of these patterns that satisfy the previous conditions
  • Find all hits by either one of these patterns that do not satisfy the previous conditions.

Hint: use mom_query with a metamotif=... argument, using the followed-by ’~~’ and report ’()’ operators (see the mom_query documentation and the metamotif syntax for details).

Answer: