ExPASy_SIB
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mot_query
form
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ESTScan
For querying the motifs. Refer to
mom_query help
for details.
mot_source
A non-empty list of motif database names.
perox
- PeroxiBase profiles
hamap
- HAMAP profiles
pat
- PROSITE patterns
freq_pat
- PROSITE patterns (frequent match producers)
prf
- PROSITE profiles
pre
- More profiles
ipat
- The PROSITE patterns from InterPro
iprf
- The PROSITE profiles from InterPro
ipfam
- The PFAM motifs from InterPro
ismart
- The SMART motifs from InterPro
ihamap
- The HAMAP profiles from InterPro
pfam_fs
- Pfam HMMs (local models)
pfam_ls
- Pfam HMMs (global models)
mot_name
A list of motif entry names (given explicitly, or implicitly using query identifiers) to be included in the results.
hide
|
text input
and_mot_name
A list of motif entry names to be included in the results (logical AND with the previous constraint).
hide
|
text input
not_mot_name
A list of motif entry names to be excluded from the results (logical NOT to restrict the two previous constraints).
hide
|
text input
desc_text
A list of words to search for.
hide
|
text input
min_score
A positive real number.
hide
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text input
prop_key
Limit the search to the sequence with the given property key(s).
hide
|
text input
prop_value
Limit the search to entries with the supplied property value(s). The exhaustive list of all entries matching the criteria is returned. This is a major distinction from the built-in synonymy mechanism that returns at most one sequence.
hide
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text input
-lim
Maximum number of rows to be returned.
hide
|
text input