user: username=GUEST



query triangle

Database of sequences
sw pep ____C Swiss-Prot details
bact pep ____C Some complete proteomes from Bacteria details
arch pep ____C Some complete proteomes from Archaea details
euk pep ____C Some complete proteomes from Eukaryota details
ur50 pep ____C UniRef50 details
ur50_win20 pep ____C UniRef50 window shuffled (w=20) details
ecoli pep ____C Escherichia coli K12 proteome details

Database of motifs
hamap prf ____Ca HAMAP profiles details
pat pat ____C PROSITE patterns details
freq_pat pat ____C PROSITE patterns (frequent match producers) details
pre prf ____C More profiles details
prf prf ____C PROSITE profiles details
ipat ipr ____C The PROSITE patterns from InterPro details
iprf ipr ____C The PROSITE profiles from InterPro details
ipfam ipr ____C The PFAM motifs from InterPro details
ismart ipr ____C The SMART motifs from InterPro details
ihamap ipr ____C The HAMAP profiles from InterPro details
pfam_fs pfam ____Ca Pfam HMMs (local models) details
pfam_ls pfam ____Ca Pfam HMMs (global models) details

Database of classifications
mnxref_2 mnxref2 ____C MetaNEtX/MNXref namespace Version 3 details
taxid tree ____C The NCBI Taxonomy details
bigg_mnet metnet ____C Metabolic networks from BiGG details
seed_mnet metnet ____Cd Metabolic networks from SEED details
slip_mnet metnet ____C Metabolic pathways from SwissLipids details
biocyc_mnet metnet ____C Metabolic pathways from BioCyc details
maranas_mnet metnet ____C Metabolic networks from Maranas lab details
yeastnet_mnet metnet ____C Metabolic networks from YeastNet details
misc_mnet metnet ____C Miscellaneous metabolic networks details
hmr_mnet metnet ____C Metabolic network from HMR details
mnxmol sdf ____C mnxmol details

List of hit (sequences vs motifs)
hamappatfreq_patpreprfipatiprfipfamismartihamappfam_fspfam_ls
sw currentcurrentcurrentcurrentcurrent
bact currentcurrentcurrentcurrentcurrent
arch currentcurrentcurrentcurrentcurrent
euk currentcurrentcurrentcurrentcurrent
ur50
ur50_win20
ecoli currentcurrentcurrentcurrentcurrent

List of hat (sequences vs classifications)
mnxref_2taxidbigg_mnetseed_mnetslip_mnetbiocyc_mnetmaranas_mnetyeastnet_mnetmisc_mnethmr_mnetmnxmol
sw current
bact current
arch current
euk currentcurrent
ur50
ur50_win20
ecoli current

List of hot (motifs vs classifications)
mnxref_2taxidbigg_mnetseed_mnetslip_mnetbiocyc_mnetmaranas_mnetyeastnet_mnetmisc_mnethmr_mnetmnxmol
hamap
pat
freq_pat
pre
prf
ipat
iprf
ipfam
ismart
ihamap
pfam_fs
pfam_ls